BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031G06SP1|AL429455
(700 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1744 1364 0.0
>3x_Contig1744
Length = 24119
Score = 1364 bits (687), Expect = 0.0
Identities = 695/697 (99%), Gaps = 1/697 (0%)
Strand = Plus / Plus
Query: 3 tcggttgtcttgctgcgatctcctccctccctctgaacacgtgccgtgttcagcgggtcc 62
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8885 tcggttgtcttg-tgcgatctcctccctccctctgaacacgtgccgtgttcagcgggtcc 8943
Query: 63 tatgtctcaaaaaactgactcgggatttcctttcccaaaacggaaactccaaaatcgccg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8944 tatgtctcaaaaaactgactcgggatttcctttcccaaaacggaaactccaaaatcgccg 9003
Query: 123 tccgcccgttatccctatctcgtatcagtaaacaggtaaaakaccttcgcaaaaacctaa 182
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 9004 tccgcccgttatccctatctcgtatcagtaaacaggtaaaataccttcgcaaaaacctaa 9063
Query: 183 acagaaagtgcggccgataagatggaaaaaggaaaacaacccagtctacgtgctttgtct 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9064 acagaaagtgcggccgataagatggaaaaaggaaaacaacccagtctacgtgctttgtct 9123
Query: 243 cctggtctgtctgacttccgattgacttcgagatacttttttgttttcactccatttgcc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9124 cctggtctgtctgacttccgattgacttcgagatacttttttgttttcactccatttgcc 9183
Query: 303 ttgttcattggttctgcaccgcgacagctgggatctagtactatagtatttgggaacggc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9184 ttgttcattggttctgcaccgcgacagctgggatctagtactatagtatttgggaacggc 9243
Query: 363 gaacgacctccactttttcccagaccagtttcccactggaataaatggcaatagctctcc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9244 gaacgacctccactttttcccagaccagtttcccactggaataaatggcaatagctctcc 9303
Query: 423 atctctgtttctccgtctgatatctcactccaaaatctcgatatcaattcgctttcgtag 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9304 atctctgtttctccgtctgatatctcactccaaaatctcgatatcaattcgctttcgtag 9363
Query: 483 tcatacatgtacggatttattccccttttcatgcatttttctcgaatcctaatctttatt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9364 tcatacatgtacggatttattccccttttcatgcatttttctcgaatcctaatctttatt 9423
Query: 543 atactataatagatatcgtttttctttataaccttaaattctatactgtgggaataagag 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9424 atactataatagatatcgtttttctttataaccttaaattctatactgtgggaataagag 9483
Query: 603 aaaaatggtgtagtcatatacagtgtgggtaaagagaggaattcagcagattactgatct 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9484 aaaaatggtgtagtcatatacagtgtgggtaaagagaggaattcagcagattactgatct 9543
Query: 663 tttacccatagcttgctgtgctaatatatatatatat 699
|||||||||||||||||||||||||||||||||||||
Sbjct: 9544 tttacccatagcttgctgtgctaatatatatatatat 9580
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8055
Number of Sequences: 1807
Number of extensions: 8055
Number of successful extensions: 1309
Number of sequences better than 1.0e-20: 1
length of query: 700
length of database: 10,358,551
effective HSP length: 16
effective length of query: 684
effective length of database: 10,329,639
effective search space: 7065473076
effective search space used: 7065473076
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)